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Yep, I checked and the both version have the same graphics quality.
But deleted the config of steam version and Factorio use 2.4Go like the Classic version.
So I checked the config file and I found what cause this.
Inside the config file, there is a line named "force-opengl". If it set as false, the game will use 2.5Go but if it set on true, it will use 700Mo.
I don't know if this problem is only on Windows (DirectX ?)